Author: Alexey Vaganov
Keywords: Herbarium, ALTB, DNA, sequence, typus, DNA barcodes, Altai, Russia, Siberia, Mongolia, China, Kazakhstan, Altai-Sayan ecoregion, occurrence

Virtual Herbarium ALTB (South-Siberian Botanical Garden)

Alexey Vaganov^1, Alexander Shmakov^1, Vladimir Zaikov^1, Elizaveta Zholnerova^1, Alexander Shalimov^1, Denis Belkin^1, Alexander Batkin^1, Petr Kosachev^1, Kristina Medvedeva^1, Nadja Usik^1, Polina Gudkova^2, Denis Dmitriev^1, Alexey Kechaykin^1

1 Altai State University, South-Siberian Botanical Garden, Lenina str. 61, Barnaul, Russian Federation; 2 Department of Botany, Altai State university, Lenina str. 61, Barnaul, Russian Federation

Corresponding author(s): Alexey Vaganov (vaganov_vav@mail.ru), Alexander Shmakov (alex_shmakov@mail.ru), Vladimir Zaikov (vz1703@mail.ru), Elizaveta Zholnerova (zholnerova.liza@mail.ru), Alexander Shalimov (man_biol@mail.ru), Denis Belkin (d.l.belkin@mail.ru), Alexander Batkin (saschabatkin@mail.ru), Petr Kosachev (pakosachev@yandex.ru), Kristina Medvedeva (medwedewa-99@rambler.ru), Nadja Usik (nadja.usik@mail.ru), Polina Gudkova (PDGudkova2017@yandex.ru), Denis Dmitriev (dmitriev.d.a@vc.asu.ru), Alexey Kechaykin (alekseikechaikin@mail.ru)

Received {date}; Revised {date}; Accepted {date}; Published {date}

Citation: Combination of authors, year of data paper publication (in parentheses), Title, Journal Name, Volume, Issue number (in parentheses), and doi of the data paper.

Resource Citation

Vaganov A (2024): Virtual Herbarium ALTB (South-Siberian Botanical Garden). v1.65. Altai State University. Dataset/Occurrence. http://altb.asu.ru http://altb.asu.ru

Abstract

"Virtual Herbarium ALTB" is a digital collection of Herbarium ALTB specimens (Barnaul, Altai State University). It is one of the most dynamically developing Herbaria in Russia, and ranks seventh in the country in terms of herbarium specimen’s number (over 450,000 sheets). Herbarium ALTB is the largest collection of plants from transboundary territory of the Altai Mountainous Country and the main empirical material of the project "Flora Altaica" (http://altaiflora.asu.ru). The Altai and Sayan territories are included to the list of program "The Global 200. Priority ecoregions for global conservation".

Keywords: Herbarium, ALTB, DNA, sequence, typus, DNA barcodes, Altai, Russia, Siberia, Mongolia, China, Kazakhstan, Altai-Sayan ecoregion, occurrence

Project details

Project title: Russia 2021
Personnel: Alexey Vaganov

Data published through GBIF: http://altb.asu.ru/ipt/resource?r=altb

Taxonomic coverage

Taxonomic ranks
Kingdom: Plantae
Common names: Plantae

Spatial coverage

General spatial coverage: The database contains an information on the biological diversity of the Altai Mountain Country (AMC) within the territories of Russia, Mongolia, China and Kazakhstan.
Coordinates: 37°59'45,6''N and 60°3'54''N Latitude; 65°44'31,2''E and 114°36'32,4''E Longitude 

Natural collections description

Collection name: Herbarium ALTB
Collection identifier: ALTB (acronim)
Specimen preservation method: Dried and pressed
Curatorial unit: Between 1 and 450000 (list)

Methods

Method step description: 

Datasets

Dataset description
Object name: Darwin Core Archive Virtual Herbarium ALTB (South-Siberian Botanical Garden)
Character encoding: UTF-8
Format name: Darwin Core Archive format
Format version: 1.0
Distribution: http://altb.asu.ru/ipt/archive.do?r=altb
Publication date of data: 2024-03-27
Language: Russian
Licences of use: Creative Commons Attribution Non Commercial (CC-BY-NC) 4.0 License

Metadata language: English
Date of metadata creation: 2020-02-14
Hierarchy level: Dataset

References
Vaganov AV, Shmakov AI, Smirnov SV, Usik NA, Shibanova AA, Kechaykin AA, Kosachev PA, Kopytina TM, Zholnerova EA, Medvedeva KE, Zaikov VF, Sinitsyna TA, Shalimov AP, Antonyuk EV, Gudkova PD, Dmitriev DA, Batkin AA, Kasatkin DE, Belkin DL (2021) Virtual Herbarium ALTB: collection of vascular plants of the Altai Mountain Country. Biodiversity Data Journal 9: e67616. https://doi.org/10.3897/BDJ.9.e67616
Vaganov AV, Medvedeva KE (2020) Current state and prospects for the development of the digital collection "Virtual Herbarium ALTB". Problems of Botany of Southern Siberia and Mongolia, 19, 1: 260–263. https://doi.org/10.14258/pbssm.2020051
Vaganov AV, Shmakov AI, Gudkova PD (2019) Global data on biodiversity of the Altai mountain country, presented in the world's scientific depositories. Acta Biologica Sibirica, 5(2), 95–101. https://doi.org/10.14258/abs.v5.i2.5937
Vaganov AV, Medvedeva K, Sinitsyna T. Complex of open access databases of Altai State University for the purposes of the Altai-Sayan ecoregion research. Abstracts of the conference "Information Technologies in the Research of Biodiversity" (BIT-2018). Irkutsk: ISDCT SB RAS, 2018. pp. 39–41.
Vaganov A.V., Sinitsyna T.A., Kutsev M.G., Skaptsov M.V., Zholnerova E.A., Kosachev P.A., Kechaykin A.A., Smirnov S.V., Shmakov A.I. DNA barcodes of the vascular flora of the Altai Mountain Country: type material of the Herbarium ALTB
 // Turczaninowia, 2022. V. 25, № 4: 5–11. https://doi.org/10.14258/turczaninowia.25.4.1
Shibanova A.A., Zholnerova E.A., Zaikov V.F., Sinitsyna T.A., Shmakov A.I., Vaganov A.V. Principles of the online Red Data Book development using biodiversity datasets: the Altai Mountain Country case. Acta Biologica Sibirica, 2022, V. 8: 583–594. https://doi.org/10.5281/zenodo.7726475
Ваганов А.В., Шмаков А.И. Гербарий ALTB в цифровую эпоху: итоги и перспективы // Российская ботаника в меняющемся мире: Тезисы докладов XV Делегатского съезда Русского ботанического общества и конференции «Российская ботаника в меняющемся мире», посвященной 300-летию Российской академии наук (г. Санкт-Петербург, 10–13 сентября 2023 года). – СПб.: Ботанический институт им. В.Л. Комарова РАН, 2023. – C. 14–15.
Ваганов А.В., Скапцов М.В.,  Кечайкин А.А.,  Шмаков А.И. Новые подходы в исследовании фиторазнообразия и генетических ресурсов Алтайской горной страны, как основа для глобальной интеграции больших данных Гербария ALTB и обмена научными результатами // Коллекции как основа изучения генетических ресурсов растений и грибов: Тезисы докладов Всероссийской конференции. Санкт-Петербург, 22–23 июня 2022 г. (в рамках Первого научного форума «Генетические ресурсы России», 21–24 июня 2022 г.). – СПб.: Ботанический институт им. В.Л. Комарова РАН, 2022,  С. – 7.